Power Analysis to Determine Precision of Genetic Stock Identification of Chinook Smolts at Chandler
Yakima Basin Aquatic Science and Management Conference
Ellensburg, WA - June 13, 2007
Summary: GSI Chandler Smolts
- Microsatellite DNA
- Differentiate Yakima Basin Chinook populations using microsatellite DNA
- Population of origin of smolts
- Identify population of origin of smolts passing Chandler
- Smolt production
- Use genetic data towards the quantification and comparison of smolt production in upper Yakima versus Naches Rivers
- 1500 smolt samples
- Analyses based on 1500 smolt samples drawn randomly from a temporally stratified collection
Questions
- Can we reduce sample size from 1500 to a smaller collection, without compromising results?
- Is 1500 sample appropriate, or should we be sampling more?
PowerPoint Presentation
The Model
- Repeat 100 times
- For each modeled sample size
- Separate analyses
- 2005 and 2006 data
- Therefore
- For each sample size 100 estimated number of smolts for Naches and upper Yakima – for both 2005 and 2006
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Questions
- Can we reduce sample size from 1500 to a smaller collection, without compromising results?
- Is 1500 sample appropriate, or should we be sampling more?
Slide 12
The Model
- Repeat 100 times
- For each modeled sample size
- Separate analyses
- 2005 and 2006 data
- Therefore
- For each sample size 100 estimated number of smolts for Naches and upper Yakima – for both 2005 and 2006
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Conclusions
- Appropriate sample size depends on desired level of precision
- Variability: Temporally (season and year) and population
- Precision (and associated error) is a function of sampling NOT genetics methods
- Other sources of error: GSI, run expansion
Acknowledgements